CRISPI : a CRISPR Interactive database (Please cite Bioinformatics. 2009 Dec 15;25(24):3317-8)


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Database Summary

Last Update = 2012-04-28 09:44:01
Genomes analysed Species analysed CRISPRs found Genomes with CRISPR Species with CRISPR Units found Spacers found Putative CAS genes
Archaea 120 104 411 96 (80%) 87 (83.65%) 11499 11088 1652
Bacteria 1594 977 1766 755 (47.37%) 558 (57.11%) 49155 47389 6024

Database Highlights

Genomes with maximal number of CRISPR number of units in a CRISPR number of CAS genes spacer size repeat size
Archaea Methanocaldococcus sp. FS406-22 chromosome (18) Sulfolobus tokodaii str. 7 chromosome (458) Pyrococcus yayanosii CH1 chromosome (47) Methanococcus vannielii SB chromosome (488) Methanocaldococcus jannaschii DSM 2661 chromosome (39)
Bacteria Thermomonospora curvata DSM 43183 chromosome (13) Haliangium ochraceum DSM 14365 chromosome (743) Rhodospirillum rubrum ATCC 11170 chromosome (44) Xylella fastidiosa M23 chromosome (574) Shewanella putrefaciens CN-32 chromosome (92)

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       Sequence type : DNA Protein
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